Reverse vaccinology and molecular docking as tools to identify potential vaccine candidates against drug-resistant Mycobacterium tuberculosis and Mycobacterium bovis

dc.contributor.author Akurut, Eva
dc.date.accessioned 2022-12-02T09:34:04Z
dc.date.available 2022-12-02T09:34:04Z
dc.date.issued 2022-03-29
dc.description A dissertation submitted to the directorate of research and graduate training in partial fulfillment of the requirements for the award of the degree of Master of Science in bioinformatics of Makerere University en_US
dc.description.abstract The emergence of multi-drug-resistant Mycobacterium tuberculosis (M.tb) and Mycobacterium bovis (M.bovis), the causative agents of Tuberculosis (TB) and zoonotic TB respectively are of significant threat to public health. TB was the leading cause of death globally from a single infectious pathogen until COVID-19. Bacillus Calmette–Guérin (BCG), the sole currently licensed vaccine in use has variable efficacy, protecting effectively against childhood TB plus extra-pulmonary TB but not active Pulmonary TB. Developing potential vaccines with long-lasting efficacy might solve this problem and avert multi-drug resistance numbers. We applied reverse vaccinology and molecular docking approaches to identify potential vaccine candidates from Ugandan globally available drug-resistant M. tuberculosis and M. bovis proteomes. The study used a conserved protein sequence to predict B-cell and T-cell epitopes and developed a multi-epitope vaccine insilico. We identified nine vaccine candidates with low global binding energies ranging from -12.91 to -30.26, and 23.82 for the multi-epitope vaccine. The multi-epitope vaccine candidate elicited both humoral and cellular responses on insilico simulation warranting it as a potential tuberculosis vaccine candidate. We recommend for more studies be done on the conserved protein tr|A0A1R3XWZ9|A0A1R3XWZ9_MYCBO as a potential vaccine candidate protein. en_US
dc.description.sponsorship BRECA-Nurturing genomics and Bioinformatics Research Capacity in Africa under NIH Fogarty (grant #5U2RTW010672-02) Infectious Disease Institute under the Fogarty International Centre, National Institute of Health (grant # 2D43TW009771-06 “HIV and Co-infections in Uganda”) en_US
dc.identifier.citation Akurut,E (2022) Reverse vaccinology and molecular docking as tools to identify potential vaccine candidates against drug resistant Mycobacterium tuberculosis and Mycobacterium bovis (Unpublished Master's dissertation) Makerere University, Kampala en_US
dc.identifier.uri http://hdl.handle.net/10570/11031
dc.language.iso en en_US
dc.publisher Makerere University en_US
dc.subject Reverse Vaccinology en_US
dc.subject Molecular Docking en_US
dc.subject Mycobacterium tuberculosis en_US
dc.subject Mycobacterium bovis en_US
dc.subject Drug-resistance en_US
dc.subject vaccine candidates en_US
dc.title Reverse vaccinology and molecular docking as tools to identify potential vaccine candidates against drug-resistant Mycobacterium tuberculosis and Mycobacterium bovis en_US
dc.type Thesis en_US
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